<?xml version="1.0" encoding="utf-8"?>
<Journal>
<Journal-Info>
<name>International Journal of Pharma and Bio Sciences</name>
<website>ijpbs.net</website>
<email>editorijpbs@rediffmail.com (or) editorofijpbs@yahoo.com (or) prasmol@rediffmail.com</email>
</Journal-Info>
<article>
<article-id pub-id-type='other'>10.22376/ijpbs.2019.10.1.p1-12</article-id>
<issue_number>Volume 4 Issue 3 </issue_number>
<issue_period>2013 (July - September)</issue_period>
<title>ISOLATION AND IN SILICO CHARACTERIZATION OF GERANIOL DEHYDROGENASE ENCODING GENE USING MODIFIED DNA EXTRACTION PROTOCOL FROM AMERICAN BASIL (OCIMUM AMERICANUM L.) </title>
<abstract>The present study deals with the identification, isolation and  lessThan i greaterThan in silico lessThan /i greaterThan  characterization of gene encoding geraniol dehydrogenase from  lessThan i greaterThan Ocimum americanum lessThan /i greaterThan . Mature leaves of plants have a higher degree of secondary metabolites that hampers the nucleic acid isolation, PCR amplification and other downstream reactions. The DNA isolation from mature leaves of  lessThan i greaterThan O. americanum lessThan /i greaterThan  is described here which involves a modified cetyl trimethyl ammonium bromide extraction protocol (3.5%) with high salt concentration to remove polysaccharides, 3% poly vinyl pyrrolidone to remove polyphenols and an extended RNase treatment. This protocol yielded genomic DNA having high quality as well as quantity. Gene specific primers were designed using Primer3 tool, amplified through PCR and sequenced.  lessThan i greaterThan In silico lessThan /i greaterThan  characterization and annotation of geraniol dehydrogenase was completed by web based tools. The newly constructed 1647 bp length sequence was submitted in NCBI (GenBank Id: JQ765502.1) and named  lessThan i greaterThan Ocimum americanum  lessThan /i greaterThan geraniol dehydrogenase ( lessThan i greaterThan OaGDH lessThan /i greaterThan ) gene.</abstract>
<authors>AAKANKSHA WANY, ASHUTOSH KUMAR, VINOD KUMAR NIGAM AND  DEV MANI PANDEY</authors>
<keywords>Cetyl trimethyl ammonium bromide, Geraniol dehydrogenase, Iterative threading assembly refinement, Poly vinyl pyrrolidone</keywords>
<pages>365-379</pages>
</article>
</Journal>
